Event Overview
Presented by the Chan Zuckerberg Biohub San Francisco in partnership with the Chan Zuckerberg Initiative and celebrating the second anniversary of the founding of the Chan Zuckerberg Biohub.
Session topics:
- Cell Identity and Atlas Efforts
- Cell Architecture – Static and Dynamic
- Model Systems & In Vitro Systems
- Single Cell Genomics & Cellular Flight Recorder
Program
Mon Sept 24
CELL IDENTITY AND ATLAS EFFORTS
Welcome to Beyond the Cell Atlas
Single-cell genomics: a stepping stone for future immunology discoveries
Ido Amit, Weizmann Institute
Tabula Muris, whole-organism single-cell transcriptomics
Spyros Darmanis, CZ Biohub
Cellular maps of intact organisms by vDISCO technology
Ali Ertürk, University of Munich
From cell atlases to cell and tissue circuits in health and disease
Aviv Regev, Broad Institute
Reconstructing the maternal-fetal interface one cell at a time
Sarah Teichmann, Wellcome Sanger Institute
CELL ARCHITECTURE – STATIC AND DYNAMIC
Single particle cryo-EM of membrane proteins
Yifan Cheng, UCSF/HHMI
Creating a state space of stem cell signatures
Rick Horwitz, Allen Institute
Dissecting the spatiotemporal subcellular distribution of the human proteome
Emma Lundberg, KTH Royal Institute of Technology
Opening windows into the cell: bringing structure to cell biology using cryo-electron tomography
Elizabeth Villa, UC San Diego
GFP-omics, illuminating intracellular architecture
Manu Leonetti, CZ Biohub
MODEL SYSTEMS AND IN VITRO SYSTEMS
Whole-body single-cell atlases in sponges and annelids reveal repeated parallel evolution of neuronal lineages
Detlev Arendt, EMBL
Tue Sept 25
CELL IDENTITY AND ATLAS EFFORTS
Conserved and divergent features of human cortical cell types revealed by single nucleus sequencing
Ed Lein, Allen Institute
Brain architecture and development by single-cell transcriptomics
Sten Linnarsson, Karolinska Institute
Mapping cell type specific genome folding in situ
Alistair Boettiger, Stanford University
CZI’s support of the Human Cell Atlas: next steps
Jonah Cool, Chan Zuckerberg Initiative
MODEL SYSTEMS AND IN VITRO SYSTEMS
Choanoflagellates as simple models for multicellularity, cell differentiation, and eukaryotic-bacterial interactions
Nicole King, UC Berkeley/HHMI
Molecular exploration of the brain at single-cell resolution
Evan Macosko, Broad Institute
Function of RNA by single-cell sequencing in space and time
Nikolaus Rajewsky, Max Delbrück Center for Molecular Medicine
Single-cell transcriptomics of the mouse kidney reveals potential cellular targets of kidney disease
Katalin Susztak, University of Pennsylvania
Reconstructing development and regeneration using single-cell transcriptomics
Barbara Treutlein, Max Planck Institute
SINGLE CELL GENOMICS AND CELLULAR FLIGHT RECORDERS
Nascent transcriptome profiling by intron seqFISH
Long Cai, Caltech
Single-cell resolution lineage tracing of cell fate reprogramming
Samantha Morris, Washington University School of Medicine
Genome architecture mapping in rare cell types
Ana Pombo, Max Delbrück Center for Molecular Medicine
Imaging whole living organisms with adaptive imaging and deep learning
Loïc Royer, CZ Biohub
Molecular recording of mammalian embryogenesis
Michelle Chan, UCSF
Single-cell genomics: when stochasticity meets precision
Sunney Xie, Peking University
Closing remarks
Presented in Partnership With
