Research
We believe in sharing the research findings of our teams and partners openly to accelerate understanding of human health and disease. We strongly encourage researchers to deposit manuscripts as preprints before peer review to increase access to research findings and to communicate results more quickly. Since 2015, we have supported more than 8,000 publications.
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A Cross-Species Generative Cell Atlas Across 1.5 Billion Years of Evolution: The TranscriptFormer Single-cell Model
James D Pearce, Sara E Simmonds, Gita Mahmoudabadi, et al. (2025) | bioRxiv
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The regulatory architecture of the primed pluripotent cell state
Li, B.I., Alvarez, M.J., Zhao, H. et al.(2025) | Nature Communications
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Systems Human Immunology and AI: Immune Setpoint and Immune Health
Yona Lei, John Tsang (2025) | Annual Review of Immunology
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Global organelle profiling reveals subcellular localization and remodeling at proteome scale
Marco Hein, Duo Peng, et al. (2025) | Cell
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KLF2 maintains lineage fidelity and suppresses CD8 T cell exhaustion during acute LCMV infection
Fagerberg E, Attanasio J, Dien C, et al. (2025) | Science
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Exon inclusion signatures enable accurate estimation of splicing factor activity.
Anglada-Girotto M, Moakley DF, Zhang C, Miravet-Verde S, et al. (2025) | bioRxiv
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How to build the virtual cell with artificial intelligence: Priorities and opportunities
Charlotte Bunne, Yusuf Roohani, Yanay Rosen et al. (2024) | Cell
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SubCell: Vision foundation models for microscopy capture single-cell biology
Ankit Gupta, Zoe Wefers, Konstantin Kahnert et al. (2024) | bioRxiv
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Active-reset protein sensors enable continuous in vivo monitoring of inflammation
H. Zargartalebi, S. Mirzaie, A. Ghavaminejad et al. (2024) | Science
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Tabula Sapiens reveals transcription factor expression, senescence effects, and sex-specific features in cell types from 28 human organs and tissues
Stephen R. Quake, The Tabula Sapiens Consortium (2024) | bioRxiv
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AI: A transformative opportunity in cell biology
Ambrose Carr, Jonah Cool, Theofanis Karaletsos et al. (2024) | Molecular Biology of the Cell
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CZ CELLxGENE Discover: a single-cell data platform for scalable exploration, analysis and modeling of aggregated data
CZI Cell Science Program, Shibla Abdulla, Brian Aevermann et al. (2024) | Nucleic Acids Research