Research
We believe in sharing the research findings of our teams and partners openly to accelerate understanding of human health and disease. We strongly encourage researchers to deposit manuscripts as preprints before peer review to increase access to research findings and to communicate results more quickly. Since 2015, we have supported more than 8,000 publications.
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rbio1-training scientific reasoning LLMs with biological world models as soft verifiers
Ana-Maria Istrate, Fausto Milletari, Fabrizio Castrotorres, et al. (2025) | bioRxiv
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GREmLN: A Cellular Regulatory Network-Aware Transcriptomics Foundation Model
Mingxuan Zhang, Vinay Swamy, Rowan Cassius, et al. (2025) | bioRxiv
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Variational Control for Guidance in Diffusion Models
Kushagra Pandey, Farrin Marouf Sofian, Felix Draxler, et al. (2025) | ICML 2025
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A Cross-Species Generative Cell Atlas Across 1.5 Billion Years of Evolution: The TranscriptFormer Single-cell Model
James D Pearce, Sara E Simmonds, Gita Mahmoudabadi, et al. (2025) | bioRxiv
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The regulatory architecture of the primed pluripotent cell state
Li, B.I., Alvarez, M.J., Zhao, H. et al.(2025) | Nature Communications
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Systems Human Immunology and AI: Immune Setpoint and Immune Health
Yona Lei, John Tsang (2025) | Annual Review of Immunology
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Global organelle profiling reveals subcellular localization and remodeling at proteome scale
Marco Hein, Duo Peng, et al. (2025) | Cell
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KLF2 maintains lineage fidelity and suppresses CD8 T cell exhaustion during acute LCMV infection
Fagerberg E, Attanasio J, Dien C, et al. (2025) | Science
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Exon inclusion signatures enable accurate estimation of splicing factor activity.
Anglada-Girotto M, Moakley DF, Zhang C, Miravet-Verde S, et al. (2025) | bioRxiv
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How to build the virtual cell with artificial intelligence: Priorities and opportunities
Charlotte Bunne, Yusuf Roohani, Yanay Rosen et al. (2024) | Cell
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SubCell: Vision foundation models for microscopy capture single-cell biology
Ankit Gupta, Zoe Wefers, Konstantin Kahnert et al. (2024) | bioRxiv
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Active-reset protein sensors enable continuous in vivo monitoring of inflammation
H. Zargartalebi, S. Mirzaie, A. Ghavaminejad et al. (2024) | Science